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Job:
Research scientist in bioinformatics, Sweden
bioinformatics
data analysis
post doc
Job
4.8 years ago
mauno.vihinen
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0
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1.3k
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Job:
Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
job
biostatistics
bioinformatics
data analysis
core facility
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5.4 years ago
Michael Prummer
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Job:
Post-doctoral Fellowship at BC Cancer Research Center, Vancouver BC
single cell
RNA
Data analysis
Bioinformatics
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5.4 years ago
jmaanaki
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Job:
Postdoctoral Research position in the Genomics of Cerebral Palsy (University of Adelaide, Australia)
Cerebral Palsy
bioinformatics
data analysis
Job
7.6 years ago
gammyknee
▴ 10
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1.8k
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Where to find open access microbiome data for case-control comparative study?
microbiome
data analysis
data request
updated 7.6 years ago by
Wolfgang Huber
★ 13k • written 7.6 years ago by
stats134711
• 0
1
vote
2
replies
3.2k
views
Tutorial for RNA-Seq Data Analysis
rnaseq
data analysis
tutorial
workflows
differential gene expression
updated 7.6 years ago by
Aaron Lun
★ 28k • written 7.6 years ago by
Pranavathiyani G
• 0
1
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4
replies
1.9k
views
New to mass spec data analysis
data analysis
xcms
Tutorial
updated 4 weeks ago by
abhisek001
• 0 • written 7.6 years ago by
Dan_reichert
• 0
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Comment: Deseq2 res Function
by
James W. MacDonald
67k
In addition to Mike's comment, do note that if you are generating a heatmap based on the set of significant genes, the direction of your co…
Answer: Struggle with the replicates of epic array data
by
James W. MacDonald
67k
You shouldn't be using beta values for a linear model that assumes a unimodal, untruncated distribution (beta values are strictly on (0-1) …
Comment: Identifying potentially associated gene set to drug response using GSVA
by
Robert Castelo
★ 3.4k
So, if I understand correctly, you derived GSVA scores from gene sets corresponding somehow to drugs in your RNA-seq data. Since GSVA score…
Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR
by
Gordon Smyth
51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Votes
Appropriate use of the function treat of the limma package
Comment: Is it recommended to analyze different tissues together when using edgeR
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
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